Hybrid Capture resolves the phylogeny of the pantropically distributed Zanthoxylum (Rutaceae) and reveals an Old World origin

ID: 613 / 433

Category: Abstract

Track: Pending

Proposed Symposium Title: Hybrid Capture resolves the phylogeny of the pantropically distributed Zanthoxylum (Rutaceae) and reveals an Old World origin


Lee Ping Ang1, Salvatore Tomasello1, Jun Wen2, Marc S. Appelhans1,2

Affiliations: 1. 1. Department of Systematics, Biodiversity and Evolution of Plants, Albrecht-von-Haller Institute of Plant Sciences, University of Goettingen, Untere Karspuele 2, 37073 Goettingen, Germany. 2. 2. Department of Botany, National Museum of Natural History, Smithsonian Institution, PO Box 37012, Washington, DC 20013-7012, USA.


With about 225 species, Zanthoxylum L. is the second most species rich genus in Rutaceae. It is the only genus with a pantropical distribution. Economically, it is used in several Asian countries as traditional medicine and spice. In the past Zanthoxylum was divided into two genera, the temperate Zanthoxylum sensu strictu (s.s.) and the (sub)tropical Fagara, due to the large differences in flower morphology: heterochlamydeous in Fagara and homochlamydeous in Zanthoxylum s.s.. This genus is much under studied and previous phylogenetic studies using Sanger sequencing did not resolve the relationships sufficiently. In this study, we use Hybrid Capture with a specially designed bait set for Zanthoxylum to sequence 347 putative single-copy genes. The taxon sampling has been largely improved as compared to previous studies and I will present preliminary results based on 371 specimens representing 133 species from all continents and major island groups. Our preliminary results reveal similar tree topology as the previous studies while providing more details to the backbone of the phylogeny. The phylogenetic tree consists of four main clades: A) African/Malagasy clade, B) Z. asiaticum clade - a clade consisting widespread species occurring in (sub)tropical Asia and Africa as well as Madagascar, C) Asian/Pacific clade and D) American clade, which also includes the temperate Asian species. The merging of Fagara and Zanthoxylum is supported by our results and the homochlamydeous flowers of Zanthoxylum s.s. are likely derived from heterochlamydeous flowers. Several of the morphologically defined sections within Zanthoxylum are not monophyletic. In this presentation, I will (1) introduce the framework of this project; (2) present preliminary results and (3) the ongoing progress of the study.

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: Zanthoxylum, phylogenomic, Hybrid capture